Research topics

Microbiome

Microbiome articles covering gut bacteria, microbial changes, microbiota research, and IBD disease mechanisms.

Page 2 of 12 · 569 articles

A review on MMP-2 modulating agents from natural and synthetic sources and their role in inflammatory bowel disease.
Inflammopharmacology

A review on MMP-2 modulating agents from natural and synthetic sources and their role in inflammatory bowel disease.

MMP-2 regulates tissue remodeling and inflammation in IBD; targeting it might help prevent barrier damage, chronic inflammation, or fibrosis but requires selective approaches to avoid harming normal repair processes.

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Enteric ChAT-Expressing Neurons Mediate the Protective Effect of Lactobacillus plantarum in Inflammatory Bowel Disease.
Advanced science (Weinheim, Baden-Wurttemberg, Germany)

Enteric ChAT-Expressing Neurons Mediate the Protective Effect of Lactobacillus plantarum in Inflammatory Bowel Disease.

The paper suggests a specific gut bacterium and its metabolite can protect against intestinal inflammation in mice by acting on enteric neurons, revealing a new neuro-immune pathway that could inform future IBD...

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Analysis of the Intestinal Microbiota in Crohn’s Disease and Therapeutic Potential of Thymus Essential Oils
Bacteria

Analysis of the Intestinal Microbiota in Crohn’s Disease and Therapeutic Potential of Thymus Essential Oils

Findings highlight cultivable gut microbiota differences in Crohn’s disease versus controls and present preliminary in vitro antimicrobial activity of two thyme essential oils—topics that may interest patients following...

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Microbiota-Associated Metabolites as Biomarkers and Therapeutic Opportunities in Inflammatory Bowel Disease
Nutrients

Microbiota-Associated Metabolites as Biomarkers and Therapeutic Opportunities in Inflammatory Bowel Disease

Microbiota-derived metabolites are linked to inflammation and gut barrier function, so they could become biomarkers or therapeutic targets for Crohn’s disease and ulcerative colitis. Patients may see future tests or...

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Gut bacterial lauroyl tryptamine reduces GPR183-associated inflammatory responses in human macrophages and T cells in vitro
Frontiers in Immunology

Gut bacterial lauroyl tryptamine reduces GPR183-associated inflammatory responses in human macrophages and T cells in vitro

This research links a gut bacterial metabolite to modulation of an immune receptor (GPR183) that is elevated in colon/rectum of ulcerative colitis patients, suggesting a possible microbiota‑to‑immune pathway relevant to...

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Discovery of novel ibuprofen-1,3,4-thiadiazole derivatives attenuating ulcerative colitis by regulating MAPK-mediated inflammation and restoring intestinal immune homeostasis.
European journal of medicinal chemistry

Discovery of novel ibuprofen-1,3,4-thiadiazole derivatives attenuating ulcerative colitis by regulating MAPK-mediated inflammation and restoring intestinal immune homeostasis.

The paper reports novel ibuprofen-derived compounds that reduce inflammation and restore intestinal immune balance in preclinical models of ulcerative colitis, suggesting a potential new drug-development direction that...

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Disrupted microbial queuosine biosynthesis contributes to dysbiosis of human inflammatory bowel disease

The study points to a specific microbiome-derived micronutrient pathway (queuosine/queuine) that appears reduced in IBD, which could help explain part of microbiome-related changes in intestinal cells and suggest new...

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Targeted Dual-Responsive Probiotic Microspheres for Sequential Protection, Adhesion, and On-Demand Release in Ulcerative Colitis Therapy
Biomacromolecules

Targeted Dual-Responsive Probiotic Microspheres for Sequential Protection, Adhesion, and On-Demand Release in Ulcerative Colitis Therapy

This study reports a new engineered oral probiotic delivery system that may increase probiotic survival, target inflamed colon tissue, and change the gut microbiome in ways that reduced colitis in mice — a potential...

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Protocol for the Therapy Personalisation Using Multiomic Analyses in Inflammatory Bowel Disease (THAMES‐IBD) Study
JCC Plus

Protocol for the Therapy Personalisation Using Multiomic Analyses in Inflammatory Bowel Disease (THAMES‐IBD) Study

People with ulcerative colitis often face trial‑and‑error when starting advanced therapies. THAMES‑IBD aims to find biological and psychosocial markers that predict who will respond, which could eventually make treatment...

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L-Proline Alleviates Dextran Sulfate Sodium-Induced Colitis by Remodeling Gut Microbiota and Inhibiting the NF-κB/STAT3 Signaling Pathway
MDPI AG

L-Proline Alleviates Dextran Sulfate Sodium-Induced Colitis by Remodeling Gut Microbiota and Inhibiting the NF-κB/STAT3 Signaling Pathway

The study suggests L‑proline can reduce colitis in a mouse model and reshapes the gut microbiome, raising the possibility that amino-acid–based dietary strategies might influence intestinal inflammation through...

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Nanoformulated Curcumin Ameliorates Ulcerative Colitis via Gut Microbiota Modulation and Barrier Function Restoration
The American Journal of Chinese Medicine

Nanoformulated Curcumin Ameliorates Ulcerative Colitis via Gut Microbiota Modulation and Barrier Function Restoration

People with ulcerative colitis may be interested because the study explores a way to boost curcumin’s activity and suggests gut microbiota changes could underlie protection against colitis.

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B cells regulate T cell transfer colitis by partially reconstituting luminal IgA and modulating the colonic microbiota
Inflammatory Bowel Diseases

B cells regulate T cell transfer colitis by partially reconstituting luminal IgA and modulating the colonic microbiota

The study suggests B cells can protect against colitis through secretory IgA that reshapes the gut microbiota, a mechanism separate from known regulatory B cell cytokines. This could point to new directions for IBD...

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Inflammatory bowel disease and breast cancer: epidemiological evidence, shared biology, and clinical management.
Inflammation research : official journal of the European Histamine Research Society ... [et al.]

Inflammatory bowel disease and breast cancer: epidemiological evidence, shared biology, and clinical management.

This review addresses whether people with IBD face higher breast cancer risk and how treatments for one disease might affect the other—questions many patients and clinicians raise when cancer and IBD overlap.

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β-Glucan-based oral nano/micro delivery systems: harnessing dual immunomodulatory and microbiota-modulating properties for targeted therapy of cancer and inflammatory bowel disease.
Nanoscale

β-Glucan-based oral nano/micro delivery systems: harnessing dual immunomodulatory and microbiota-modulating properties for targeted therapy of cancer and inflammatory bowel disease.

Researchers are exploring new oral delivery carriers that could deliver drugs directly to inflamed intestinal sites while also modulating immune responses and the gut microbiome. If translated, these approaches might...

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Palisade Bio Presents New Clinical, Pharmacokinetic, Pharmacodynamic and Mechanistic Data Strengthening the Phase 2 Rationale for PALI-2108 in Ulcerative Colitis and Crohn’s ...

Early Phase 1 findings suggest a gut-targeted PDE4 prodrug may engage its target in diseased tissue and produce early improvements in symptoms, endoscopy, and tissue inflammation — findings that, if confirmed in Phase 2,...

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Gut microbiota, microbial metabolites, and mucosal barrier dysfunction in benign anorectal disorders and ulcerative colitis: shared mechanisms, clinical links, and precision interventions
Frontiers in Medicine

Gut microbiota, microbial metabolites, and mucosal barrier dysfunction in benign anorectal disorders and ulcerative colitis: shared mechanisms, clinical links, and precision interventions

The review links microbiome, metabolites, barrier function, and immune responses across anorectal disorders and ulcerative colitis — areas that directly affect symptoms, healing, and response to therapy.

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Type 6 secretion systems of adherent-invasive Escherichia coli isolated from Crohn's disease patients shape intestinal microbiota.
Europe PMC

Type 6 secretion systems of adherent-invasive Escherichia coli isolated from Crohn's disease patients shape intestinal microbiota.

The study identifies a bacterial mechanism (T6SS) that may help AIEC strains compete with normal gut microbes and colonize the intestinal mucosa — a process relevant to Crohn’s disease biology and future...

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Four dietary flavonoids differentially modulate the gut microbiota–barrier interaction against colitis-driven cognitive deficits
npj Science of Food

Four dietary flavonoids differentially modulate the gut microbiota–barrier interaction against colitis-driven cognitive deficits

Preclinical evidence suggests certain dietary flavonoids may protect the gut barrier, reshape the microbiome, and reduce neuroinflammation, which could be relevant to colitis-linked cognitive problems. This points to...

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The zc3h6 deficiency causes gut microbiota dysbiosis and inflammatory bowel disease-like symptoms in zebrafish.
Journal of genetics and genomics = Yi chuan xue bao

The zc3h6 deficiency causes gut microbiota dysbiosis and inflammatory bowel disease-like symptoms in zebrafish.

Based on the title and source metadata, this appears to be a basic science related to Inflammatory bowel disease, Microbiome, and Research and clinical trials. The original article is from Journal of genetics and...

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Mapping mitochondria-associated research in inflammatory bowel disease: A bibliometric and network analysis.
Medicine

Mapping mitochondria-associated research in inflammatory bowel disease: A bibliometric and network analysis.

This paper maps where and how mitochondria-related IBD research has grown and what themes (like mitophagy, metabolism, and machine learning) are emerging — useful for researchers, funders, and clinicians tracking...

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Investigation of Vancomycin Efficacy in Patients With Ulcerative Colitis and Primary Sclerosing Cholangitis
ClinicalTrials.gov

Investigation of Vancomycin Efficacy in Patients With Ulcerative Colitis and Primary Sclerosing Cholangitis

People with UC and PSC have limited study data on microbiome-targeted therapies; this trial asks whether short-course oral vancomycin is feasible and safe in this specific group and will look for early signals in...

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Microbiota–host crosstalk in ulcerative colitis: mechanistic evidence and translational prospects for traditional Chinese medicine
Frontiers in Pharmacology

Microbiota–host crosstalk in ulcerative colitis: mechanistic evidence and translational prospects for traditional Chinese medicine

People with ulcerative colitis may be interested because the review explains how the gut microbiome and its metabolites could influence disease and evaluates whether traditional Chinese medicines might modify those...

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Tegoprazan regulates gut microbiota structure in Helicobacter pylori-induced ulcerative colitis mice
Folia Microbiologica

Tegoprazan regulates gut microbiota structure in Helicobacter pylori-induced ulcerative colitis mice

Based on the title and source metadata, this appears to be a basic science related to Ulcerative colitis, Inflammatory bowel disease, and Microbiome. The original article is from Folia Microbiologica.

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Titanium dioxide exposure during gestation is critical to worsen DSS-induced colitis
Springer Science and Business Media LLC

Titanium dioxide exposure during gestation is critical to worsen DSS-induced colitis

If findings translate beyond mice, exposure to titanium dioxide during pregnancy could influence offspring gut barrier, microbiota, and susceptibility to inflammatory colitis — a potential public-health concern for...

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Engineering extracellular vesicles for inflammatory bowel disease and colitis-associated colorectal cancer: from therapeutic innovation to clinical translation
Frontiers in Immunology

Engineering extracellular vesicles for inflammatory bowel disease and colitis-associated colorectal cancer: from therapeutic innovation to clinical translation

Engineered extracellular vesicles are an emerging, targeted therapy approach that could someday improve immune control, mucosal healing, and drug delivery in IBD and reduce colitis-associated cancer risk. The review...

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Tripartite Interplay of Epithelial, Immune, and Microbiota Dysregulation in Crohn's Disease: Mechanisms and Translational Strategies
Immunity, inflammation and disease

Tripartite Interplay of Epithelial, Immune, and Microbiota Dysregulation in Crohn's Disease: Mechanisms and Translational Strategies

Based on the title and source metadata, this appears to be a systematic review or meta analysis related to Crohn's disease, Inflammatory bowel disease, and Microbiome. The original article is from Immunity, inflammation...

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Omnidirectional Interaction Networks Modulating Phenotypic Plasticity in the Gut Microbiota Towards Ulcerative Colitis
Advanced Science

Omnidirectional Interaction Networks Modulating Phenotypic Plasticity in the Gut Microbiota Towards Ulcerative Colitis

The paper suggests that changes in how microbes interact (community plasticity and network structure) may underlie microbiome differences seen in ulcerative colitis and could point toward ecology-informed biomarkers or...

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Barrier-reinforcing hyaluronic acid-bilirubin nanodelivery of methylprednisolone for synergistic modulation of the intestinal barrier, immune system, and gut microbiome in colitis.
Journal of controlled release : official journal of the Controlled Release Society

Barrier-reinforcing hyaluronic acid-bilirubin nanodelivery of methylprednisolone for synergistic modulation of the intestinal barrier, immune system, and gut microbiome in colitis.

Researchers are exploring ways to deliver steroids to the inflamed gut while lowering systemic side effects; a nanoparticle carrier that protects the epithelium and concentrates drug in the colon could, if translated,...

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Spleen-targeted ultrasound restores gut-brain homeostasis in colitis via vagal neuroimmune modulation.
Brain, behavior, and immunity

Spleen-targeted ultrasound restores gut-brain homeostasis in colitis via vagal neuroimmune modulation.

The study suggests a noninvasive spleen-targeted ultrasound approach can reduce gut and brain inflammation and improve behavior in a mouse colitis model, mediated by vagal signaling—pointing to a possible new avenue for...

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Harnessing Paeonia lactiflora-derived antioxidant carbon dots as oral nanomedicine for ulcerative colitis therapy by restoring intestinal mucosal barrier and microbiota homeostasis
Nano Today

Harnessing Paeonia lactiflora-derived antioxidant carbon dots as oral nanomedicine for ulcerative colitis therapy by restoring intestinal mucosal barrier and microbiota homeostasis

Based on the title and source metadata, this appears to be a clinical study related to Ulcerative colitis, Inflammatory bowel disease, and Microbiome. The original article is from Nano Today.

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The Therapeutic Potential of Berry-Derived and Berry-Based Interventions in Inflammatory Bowel Disease: A Comprehensive Systematic Review of Preclinical and Clinical Evidence
Nutrients

The Therapeutic Potential of Berry-Derived and Berry-Based Interventions in Inflammatory Bowel Disease: A Comprehensive Systematic Review of Preclinical and Clinical Evidence

Berries are a familiar, dietary source of anti-inflammatory bioactive compounds that might help reduce intestinal inflammation and improve biomarkers relevant to IBD. Patients often seek safe, complementary strategies...

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Pediococcus acidilactici ZQ-19 Ameliorates Ulcerative Colitis via Remodeling Gut Microbiota and Glutathione Redox Homeostasis
Probiotics and Antimicrobial Proteins

Pediococcus acidilactici ZQ-19 Ameliorates Ulcerative Colitis via Remodeling Gut Microbiota and Glutathione Redox Homeostasis

Based on the title and source metadata, this appears to be a clinical study related to Ulcerative colitis, Microbiome, and Diet and lifestyle. The original article is from Probiotics and Antimicrobial Proteins.

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Curcumin in inflammatory bowel disease: highlighting gut microbiota-metabolite-host interactions.
Food & function

Curcumin in inflammatory bowel disease: highlighting gut microbiota-metabolite-host interactions.

Curcumin is a common dietary compound that reaches the colon and may interact with gut bacteria and host immune and barrier pathways implicated in IBD. Understanding these interactions could inform dietary approaches or...

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Enterotype-based stratification identifies clinically distinct microbial subtypes in inflammatory bowel disease.
Inflammatory bowel diseases

Enterotype-based stratification identifies clinically distinct microbial subtypes in inflammatory bowel disease.

Microbiome patterns in this study were linked to inflammation (fecal calprotectin) and higher chance of needing treatment escalation. If validated, enterotype stratification could help predict disease course or tailor...

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