Evidence types

Basic Science

Basic science articles covering early-stage IBD research, disease mechanisms, lab findings, microbiome work, genetics, and experimental models.

Page 4 of 15 · 708 articles

The IKKε-GABPA axis regulates STING transcription to orchestrate antiviral immunity and inflammation.
The Journal of experimental medicine

The IKKε-GABPA axis regulates STING transcription to orchestrate antiviral immunity and inflammation.

The work links a specific transcriptional regulator (GABPA) to STING-driven interferon and inflammatory responses and shows relevance to IBD and SLE patient samples, pointing to a potential new target for therapies aimed...

Read Summary
Engineered E. coli Nissle 1917 alleviates colitis-associated depression via gut-brain axis restoration.
Science bulletin

Engineered E. coli Nissle 1917 alleviates colitis-associated depression via gut-brain axis restoration.

IBD patients often have depression and anxiety that current anti-TNF biologics do not adequately treat. An engineered probiotic that both neutralizes local TNFα and promotes GABA-producing microbes could address...

Read Summary
Identification of CD40 as the target of artemisinin via targeted degradomics for ulcerative colitis.
Bioorganic chemistry

Identification of CD40 as the target of artemisinin via targeted degradomics for ulcerative colitis.

This study suggests an existing antimalarial drug, artemisinin, may reduce inflammation and improve gut barrier function in a mouse model of ulcerative colitis by targeting CD40 — a pathway relevant to immune-driven gut...

Read Summary
Development and Evaluation of an Eudragit-Coated Colon-Targeted Delivery System for Myrica esculenta in Ulcerative Colitis.
Current pharmaceutical biotechnology

Development and Evaluation of an Eudragit-Coated Colon-Targeted Delivery System for Myrica esculenta in Ulcerative Colitis.

A colon-targeted delivery system could allow an anti-inflammatory plant extract (Myrica esculenta) to reach the colon with minimal systemic exposure, which may be relevant for developing localized treatments for...

Read Summary
Selenium nanoparticles alleviate ulcerative colitis by regulating macrophage mitochondrial dynamics
Free Radical Biology and Medicine

Selenium nanoparticles alleviate ulcerative colitis by regulating macrophage mitochondrial dynamics

Based on the title and source metadata, this appears to be a basic science related to Ulcerative colitis, Inflammatory bowel disease, and Research and clinical trials. The original article is from Free Radical Biology...

Read Summary
Cinnamaldehyde-hollow mesoporous Prussian blue nanozymes for ulcerative colitis via reactive oxygen and nitrogen species scavenging and gut microbiota-metabolism modulation
Journal of Drug Delivery Science and Technology

Cinnamaldehyde-hollow mesoporous Prussian blue nanozymes for ulcerative colitis via reactive oxygen and nitrogen species scavenging and gut microbiota-metabolism modulation

Based on the title and source metadata, this appears to be a basic science related to Ulcerative colitis, Inflammatory bowel disease, and Microbiome. The original article is from Journal of Drug Delivery Science and...

Read Summary
Synergistic polyphenol nanozyme–DNAzyme targeting of M1 macrophages for STAT1 silencing and inflammation suppression in ulcerative colitis
Chemical Engineering Journal

Synergistic polyphenol nanozyme–DNAzyme targeting of M1 macrophages for STAT1 silencing and inflammation suppression in ulcerative colitis

Based on the title and source metadata, this appears to be a basic science related to Ulcerative colitis, Inflammatory bowel disease, and Research and clinical trials. The original article is from Chemical Engineering...

Read Summary
Akkermansia muciniphila WW001 protects against DSS-induced colitis by restoring intestinal barrier integrity and modulating inflammatory responses.
Folia microbiologica

Akkermansia muciniphila WW001 protects against DSS-induced colitis by restoring intestinal barrier integrity and modulating inflammatory responses.

The study identifies an A. muciniphila strain (WW001) that strengthened barrier function and reduced inflammation in lab and mouse models of colitis, pointing to a possible microbiome-based probiotic strategy for IBD...

Read Summary
Fecal microbiota fermenting simple organic carbon substrates in vitro as microbial factories capable of distinguishing Crohn's disease from healthy states.
Microbial cell factories

Fecal microbiota fermenting simple organic carbon substrates in vitro as microbial factories capable of distinguishing Crohn's disease from healthy states.

The study shows functional differences in how Crohn’s versus healthy fecal microbiota ferment substrates, with CD cultures making less beneficial butyrate and more ethanol/amino acids. That could inform future...

Read Summary
Viral–Gut Microbiota Interactions: Implications for the Gut Mucosa in Inflammatory Bowel Disease
International Journal of Molecular Sciences

Viral–Gut Microbiota Interactions: Implications for the Gut Mucosa in Inflammatory Bowel Disease

Viruses in the gut (including bacteriophages) could influence inflammation and the intestinal barrier in IBD, so understanding the virome may point to new research directions or therapies.

Read Summary
Oleanolic acid improves intestinal inflammation and fibrosis in Crohn's disease via regulation the target of PPAR-γ based on network pharmacology analysis combined with experimental validation
Journal of Radiation Research and Applied Sciences

Oleanolic acid improves intestinal inflammation and fibrosis in Crohn's disease via regulation the target of PPAR-γ based on network pharmacology analysis combined with experimental validation

Based on the title and source metadata, this appears to be a basic science related to Crohn's disease, Inflammatory bowel disease, and Research and clinical trials. The original article is from Journal of Radiation...

Read Summary
Engineering a Built-in Piezoelectric Electron Sponge in Swallow Nanozyme for Inflammatory Bowel Disease Therapy.
Small (Weinheim an der Bergstrasse, Germany)

Engineering a Built-in Piezoelectric Electron Sponge in Swallow Nanozyme for Inflammatory Bowel Disease Therapy.

The article reports a new oral nanozyme that combines imaging and ROS-scavenging therapy aimed at IBD lesions—an early-stage approach that could one day enable targeted, noninvasive treatment and lesion tracking.

Read Summary
Anti-inflammatory activity of Chlorella polysaccharide AHP.
Molecular and cellular biochemistry

Anti-inflammatory activity of Chlorella polysaccharide AHP.

The study reports that Chlorella-derived polysaccharide AHP reduced inflammation, supported barrier repair, and changed gut microbiota in cell and mouse colitis models—suggesting a potential new bioactive candidate for...

Read Summary
A bioactive lysate of Corynebacterium glutamicum orchestrates intestinal barrier repair mainly through L-arginine-mediated FOXO pathway.
Food research international (Ottawa, Ont.)

A bioactive lysate of Corynebacterium glutamicum orchestrates intestinal barrier repair mainly through L-arginine-mediated FOXO pathway.

The study suggests a bacterial lysate and L-arginine can restore intestinal barrier function in cell and mouse models — a process that could be relevant to IBD because barrier dysfunction contributes to disease activity.

Read Summary
Bayesian Inference of Differential Metabolic Fluxes in Ulcerative Colitis using High-throughput Transcriptomics Data
Open Engineering Inc

Bayesian Inference of Differential Metabolic Fluxes in Ulcerative Colitis using High-throughput Transcriptomics Data

New computational tools that tie gene-expression to metabolic flux could help researchers identify metabolic pathways or biomarkers linked to ulcerative colitis, which might eventually inform research on disease...

Read Summary
Nanoencapsulated flavonoids for inflammatory bowel disease: a targeted approach toward clinical application
npj Science of Food

Nanoencapsulated flavonoids for inflammatory bowel disease: a targeted approach toward clinical application

Nanoencapsulated flavonoids are proposed as a way to improve delivery of biologically active dietary compounds to the inflamed gut in IBD; a rational design framework could accelerate translation from bench research to...

Read Summary
Lactiplantibacillus plantarum Lp05 ensures immune developmental safety and protects against colitis via promoting Treg differentiation in mice
Microbiology Spectrum

Lactiplantibacillus plantarum Lp05 ensures immune developmental safety and protects against colitis via promoting Treg differentiation in mice

This preclinical study suggests a specific probiotic strain (Lp05) can increase regulatory T cells and reduce inflammation in a mouse colitis model, which could point to new microbiome-based approaches for IBD in the...

Read Summary
The role of metabolic crosstalk between Intestinal epithelial cells and immune cells in inflammatory bowel disease and targeting strategies
Frontiers in Immunology

The role of metabolic crosstalk between Intestinal epithelial cells and immune cells in inflammatory bowel disease and targeting strategies

Metabolic interactions between epithelial and immune cells may help explain persistent inflammation and barrier problems in IBD and point to new therapeutic targets that could complement current immune-targeting drugs.

Read Summary
Understanding the Mechanistic Connection between Dysbiosis and Polyamine Regulation in Oral and Intestinal Inflammation- Role of Tregs and Th17 Cells.
Journal of cellular immunology

Understanding the Mechanistic Connection between Dysbiosis and Polyamine Regulation in Oral and Intestinal Inflammation- Role of Tregs and Th17 Cells.

The review links changes in the microbiome and microbial polyamine production to immune cell imbalance that can drive both oral inflammation and IBD. Understanding this pathway could point to new research directions and...

Read Summary
N6-methyladenosine RNA methylation in relation to the inflammatory response, immunity and the intestinal microbiota in inflammatory bowel disease
World Journal of Gastroenterology

N6-methyladenosine RNA methylation in relation to the inflammatory response, immunity and the intestinal microbiota in inflammatory bowel disease

m6A RNA methylation is a regulator of RNA function that may influence inflammation, immunity, and the intestinal microbiota — all central to IBD. Understanding these pathways could identify new biomarkers or drug targets...

Read Summary
Assembled Hyaluronic Acid Therapeutics for Targeting M1 Macrophages and Regulating Immune Homeostasis for Ulcerative Colitis Treatment
Advanced Science

Assembled Hyaluronic Acid Therapeutics for Targeting M1 Macrophages and Regulating Immune Homeostasis for Ulcerative Colitis Treatment

This study describes a novel, non‑drug HA‑based nano‑assembly that targets inflammatory M1 macrophages and reshapes the colonic immune environment in mouse models of ulcerative colitis — a potential new therapeutic...

Read Summary
Identification of Transcriptional Hippo Response Signature Connecting Inflammatory Bowel Disease and Colorectal Cancer Progression
medRxiv

Identification of Transcriptional Hippo Response Signature Connecting Inflammatory Bowel Disease and Colorectal Cancer Progression

This study maps a shared transcriptional programme linking inflamed IBD tissue to colorectal cancer pathways, highlighting potential biomarker and prevention targets relevant to the inflammation-to-cancer transition.

Read Summary
Dietary choline prevents colitis-driven carcinogenesis via SLC5A7-dependent Notch1 degradation and goblet cell reprogramming.
Mucosal immunology

Dietary choline prevents colitis-driven carcinogenesis via SLC5A7-dependent Notch1 degradation and goblet cell reprogramming.

IBD patients have higher risk of colitis-associated colorectal cancer; this study suggests dietary choline might protect the intestinal barrier and reduce inflammation-driven tumor risk via a nutrient–transporter–Notch1...

Read Summary
Stabilizing Macrophage Immune States through Fusion-Enabled Nanoparticle-Based Intracellular Drug Depots for Durable Ulcerative Colitis Therapy
ACS Nano

Stabilizing Macrophage Immune States through Fusion-Enabled Nanoparticle-Based Intracellular Drug Depots for Durable Ulcerative Colitis Therapy

Researchers are exploring ways to durably modulate macrophages in ulcerative colitis because persistent pro-inflammatory macrophages sustain tissue inflammation and impair healing.

Read Summary
GPR97 is a novel diagnostic biomarker and immunomodulatory target in ulcerative colitis: evidence from integrated bioinformatics and experimental validation
Springer Science and Business Media LLC

GPR97 is a novel diagnostic biomarker and immunomodulatory target in ulcerative colitis: evidence from integrated bioinformatics and experimental validation

Finding reliable diagnostic biomarkers could help detect UC earlier and clarify immune mechanisms that drive disease; GPR97 is proposed here as such a marker and a possible immunomodulatory target, which may interest...

Read Summary
KARAP Exacerbates Intestinal Inflammation Through Promoting Kyn-AhR-dependent Neutrophil Activation in Ulcerative Colitis.
Cellular and molecular gastroenterology and hepatology

KARAP Exacerbates Intestinal Inflammation Through Promoting Kyn-AhR-dependent Neutrophil Activation in Ulcerative Colitis.

The paper identifies a neutrophil-related immune pathway (KARAP → IDO1–kynurenine → AhR → IL-22) that contributes to mucosal inflammation in ulcerative colitis, suggesting a potential new target for research and drug...

Read Summary
UBE2L6 drives ulcerative colitis progression by promoting BIRC2 degradation and activating non-canonical NF-κB signalling
Inflammation Research

UBE2L6 drives ulcerative colitis progression by promoting BIRC2 degradation and activating non-canonical NF-κB signalling

Based on the title and source metadata, this appears to be a basic science related to Ulcerative colitis, Inflammatory bowel disease, and Research and clinical trials. The original article is from Inflammation Research.

Read Summary
Machine learning meets network toxicology: identifying LOXL2 as a key player in ulcerative colitis
Toxicological Research

Machine learning meets network toxicology: identifying LOXL2 as a key player in ulcerative colitis

Based on the title and source metadata, this appears to be a basic science related to Ulcerative colitis, Inflammatory bowel disease, and AI and data science. The original article is from Toxicological Research.

Read Summary
Integrative transcriptomic analysis links epithelial PCK1 dysregulation to ulcerative colitis and acetyl-l-carnitine-mediated inflammatory modulation.
International immunopharmacology

Integrative transcriptomic analysis links epithelial PCK1 dysregulation to ulcerative colitis and acetyl-l-carnitine-mediated inflammatory modulation.

This identifies a metabolism-related epithelial gene (PCK1) linked to inflammation in UC and suggests acetyl‑L‑carnitine can partially reverse those changes in cell and mouse models—information that could guide future...

Read Summary
Single-cell profiling reveals stromal niche and α5β1 regulation of neutrophil phenotypes in ulcerative colitis
bioRxiv

Single-cell profiling reveals stromal niche and α5β1 regulation of neutrophil phenotypes in ulcerative colitis

The study suggests stromal fibroblasts can drive pro-inflammatory neutrophil programs in ulcerative colitis and that targeting fibroblast-associated pathways may reduce neutrophil-driven inflammation—information that...

Read Summary
Anti-Inflammatory Protein Hydrolysate Screened from Crayfish Shells Attenuates Colitis by Oxidative Stress Suppression, Inflammation Reduction and Barrier Reconstruction
Foods

Anti-Inflammatory Protein Hydrolysate Screened from Crayfish Shells Attenuates Colitis by Oxidative Stress Suppression, Inflammation Reduction and Barrier Reconstruction

The study identifies a food-industry by-product (crayfish shells) as a source of peptides that reduced inflammation and improved barrier and antioxidant markers in cell and mouse colitis models—research that could inform...

Read Summary
A causal machine learning framework for treatment personalization in clinical trials: application to ulcerative colitis
BMC Medical Research Methodology

A causal machine learning framework for treatment personalization in clinical trials: application to ulcerative colitis

Based on the title and source metadata, this appears to be a basic science related to Ulcerative colitis, AI and data science, and Research and clinical trials. The original article is from BMC Medical Research...

Read Summary
Integrative Multi-Omics and Machine Learning Reveal Senescent Fibroblast-Associated ADAMTS2 as a Critical Indicator of Intestinal Inflammation in IBD.
FASEB journal : official publication of the Federation of American Societies for Experimental Biology

Integrative Multi-Omics and Machine Learning Reveal Senescent Fibroblast-Associated ADAMTS2 as a Critical Indicator of Intestinal Inflammation in IBD.

Identifies a fibroblast senescence signature and highlights ADAMTS2 as a candidate biomarker linked to inflammation and fibrosis in IBD, which could guide future diagnostic or therapeutic research relevant to Crohn’s...

Read Summary